Specify Cost Function and Input File for Metabolomics Pathway Coverage Report
The Pathway Covering tool takes as input a set of metabolites M from a metabolomics experiment.
Let’s call MP the subset of M that are substrates of a metabolic pathway within the current organism.
The Pathway Covering tool computes a minimal-cost set of metabolic pathways from the current organism
that include (cover) all of the metabolites in MP. We provide several alternative cost functions
that can produce different pathway covering sets: