Public SmartTables Directory

Welcome to SmartTables

A SmartTable is a collection of BioCyc objects, such as genes or metabolites, together with associated data, that can be created, edited, manipulated, and shared on the web.

[SmartTables Documentation] [Directory of SmartTables Users]

	SmartTable	Description	Organism	Type	Size	Owner	Update Time
1	Selected rows from All transporters of C. difficile CD196			proteins	9	Hualiang Pi	Wed Jan 20 2021 01:01 pm
2	Alignment Example	Simple set of organisms for demonstrating multiple sequence alignment.		ocelot-kb	4	Peter Midford	Wed Jan 20 2021 06:28 am
3	All protein complexes of E. coli K-12 substr. MG1655	All protein complexes in EcoCyc, with columns for their components and the corresponding genes.	Escherichia coli K-12 substr. MG1655	proteins, complexes	1136	Suzanne Paley	Thu Jan 07 2021 11:24 am
4	Location, Copy-Number, esentiality, All genes of E. coli K-12 substr. MG1655		Escherichia coli K-12 substr. MG1655	all-genes	4709	Tatsuya Sakaguchi	Mon Jan 04 2021 06:18 pm
5	ontology_All_compounds_MetaCyc		MetaCyc	proteins, compounds	16631	Wiley Barton	Fri Jan 01 2021 09:20 am
6	ontology_All_pathways_MetaCyc		MetaCyc	pathways	3228	Wiley Barton	Fri Jan 01 2021 09:04 am
7	Ontology_all_instances_v1_public		MetaCyc	pathways	3143	Wiley Barton	Tue Dec 29 2020 08:00 am
8	front-door regulatory motifs	Matches all regulatory motifs of the form Cause -> Mediator -> Effect and Cause <- Regulator -> ...	Escherichia coli K-12 substr. MG1655	all-genes	151	Jeremy Zucker	Sat Dec 19 2020 05:11 pm
9	Curated_DNA_binding_transcriptional_regulators		Escherichia coli K-12 substr. MG1655	all-genes	300	Scott Saunders	Thu Dec 10 2020 06:38 pm
10	Gold_standard_transcription_units	Gold standard transcription units / promoters from RegSeq paper.	Escherichia coli K-12 substr. MG1655	promoters	18	Scott Saunders	Fri Dec 04 2020 04:12 pm
11	AA_TUs		Escherichia coli K-12 substr. MG1655	transcription-units	11	Scott Saunders	Wed Dec 02 2020 01:34 pm
12	measured_genes		Escherichia coli K-12 substr. MG1655	all-genes	58	Naoki Hatanaka	Wed Dec 02 2020 01:57 am
13	New SmartTable with 2-methylserine		MetaCyc	compounds	1	Danielle Vigil	Mon Nov 30 2020 05:22 am
14	Gold_standard_TF_binding_sites		Escherichia coli K-12 substr. MG1655	dna-binding-sites	57	Scott Saunders	Wed Nov 25 2020 04:30 pm
15	Gold_Standard_Transcription_units_public		Escherichia coli K-12 substr. MG1655	transcription-units	15	Scott Saunders	Wed Nov 25 2020 11:46 am
16	New SmartTable with trpA			all-genes	4	Anamika Kothari	Wed Nov 11 2020 09:39 am
17	All compounds of MetaCyc		MetaCyc	compounds	16179	Joanna Wolthuis	Wed Oct 28 2020 01:50 pm
18	Cornerstone Cheeses		MetaCyc	reactions	5869	Ben Robinson	Sun Oct 25 2020 03:32 pm
19	Essential genes in Clostridioides difficile R20291	SmartTable created from essential genes reported in Dembek et al., MBio 6(2):e02383 (2015).	Clostridioides difficile R20291	all-genes	377	Ingrid Keseler	Wed Sep 30 2020 09:23 am
20	Growth-Status of all genes (E. coli K-12 substr. MG1655)		Escherichia coli K-12 substr. MG1655	all-genes	4708	Tatsuya Sakaguchi	Thu Sep 24 2020 04:02 pm

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