Public SmartTables Directory

Welcome to SmartTables

A SmartTable is a collection of BioCyc objects, such as genes or metabolites, together with associated data, that can be created, edited, manipulated, and shared on the web.

[SmartTables Documentation]  [Directory of SmartTables Users]

You can save SmartTables if you log in.
Sort upSort down SmartTable
Sort upSort down Description
Organism
Type
Size
Sort upSort down Owner
Sort upSort down Update Time
1Essential genes in Clostridioides difficile R20291SmartTable created from essential genes reported in Dembek et al., MBio 6(2):e02383 (2015).
Clostridioides difficile R20291
all-genes
377
Ingrid KeselerWed Sep 30 2020 09:23 am
2Growth-Status of all genes (E. coli K-12 substr. MG1655)
Escherichia coli K-12 substr. MG1655
all-genes
4708
Tatsuya SakaguchiThu Sep 24 2020 04:02 pm
3Copy number and essentiality of all genes (E. coli K-12 substr. MG1655)
Escherichia coli K-12 substr. MG1655
all-genes
4703
Tatsuya SakaguchiTue Sep 15 2020 08:41 am
4front-door regulatory motifsMatches all regulatory motifs of the form Cause -> Mediator -> Effect and Cause <- Regulator -> ...
Escherichia coli K-12 substr. MG1655
all-genes
151
Jeremy ZuckerTue Sep 01 2020 12:00 am
5New SmartTable - 2020-08-20T04:13:12-07:00
MetaCyc
pathways
387
Paschalis NatsidisThu Aug 20 2020 05:00 am
6COG-annotations-and-functional-groupsCOG annotations and functional classes Based on: Galperin MY, Makarova KS, Wolf YI, Koonin EV. Exp...
Escherichia coli K-12 substr. MG1655
all-genes
2834
H DeterTue Jul 21 2020 08:11 am
7Cellular state biomarkers
Bacillus subtilis subtilis 168
all-genes
11
YIMING HUANGSat Jul 04 2020 11:48 am
8All compounds of S. cerevisiae S288c
Saccharomyces cerevisiae S288c
proteins, compounds
1569
John W. K. OliverTue Jun 16 2020 10:35 pm
9GeneGO_Desulfovibriovulgaris

all-genes
3226
Bryant ChambersWed May 13 2020 11:38 am
10RNA-seq data for RpoD_WT at 37C
Escherichia coli K-12 substr. MG1655
all-genes
4418
Bokyung SonWed May 06 2020 07:45 am
11All CG data E. coi vs TelluriteAll Chemical Genomics data from E. coli vs tellurite
Escherichia coli K-12 substr. MG1655
string, all-genes
3521
Roberto LuraschiTue May 05 2020 09:27 am
12E. coli binding-sitesTo generate this ST, I started with the special ST for all transcription factors. I then added the t...
Escherichia coli K-12 substr. MG1655
dna-binding-sites
3153
Suzanne PaleyMon Apr 27 2020 12:47 am
13DESeq ZC vs YC

string, all-genes
243
Matthew HinderhoferThu Apr 16 2020 10:07 am
14DESeq YC vs YMC

all-genes
43
Matthew HinderhoferThu Apr 16 2020 10:05 am
15DESeq ZC vs ZB

string, all-genes
548
Matthew HinderhoferThu Apr 16 2020 10:04 am
16New SmartTable with HDCHBGLK_RS13665

all-genes
1
Suzanne PaleyThu Mar 12 2020 12:43 pm
17All compounds of MetaCyc
MetaCyc
proteins, compounds
14338
Joanna WolthuisSun Feb 09 2020 03:05 am
18InsH proteins
Escherichia coli K-12 substr. MG1655
all-genes
12
Ingrid KeselerTue Feb 04 2020 09:16 am
19All_reactions_EC_MetaCyc
MetaCyc
reactions
15499
Neeraj KumarSat Feb 01 2020 11:21 am
20Essential genes in Pseudomonas
Pseudomonas putida KT2440
all-genes
3
Jeremy ZuckerTue Jan 28 2020 04:23 pm
 1 2 3 4 5 6 7 8 9 10 11 Next Show all 

Report Errors or Provide Feedback
Page generated by Pathway Tools version 24.5 (software by SRI International) on Thu Oct 22, 2020, pigweed.
MetaCyc version 24.5.