Public SmartTables Directory

Welcome to SmartTables

A SmartTable is a collection of BioCyc objects, such as genes or metabolites, together with associated data, that can be created, edited, manipulated, and shared on the web.

[SmartTables Documentation] [Directory of SmartTables Users]

	SmartTable	Description	Organism	Type	Size	Owner	Update Time
1	All promoters of E. coli K-12 substr. MG1655	Trying to get only s54..	Escherichia coli K-12 substr. MG1655	promoters	3868	Amanda Wilczek	Fri Jun 07 2019 08:04 am
2	ST000061: Human metabolomics study of subcutaneous vs. visceral adipose tissue	This data is derived from dataset ST000061 in the Metabolomics Workbench data repository, and contai...	Homo sapiens	compounds	107	Suzanne Paley	Tue Jun 04 2019 10:52 am
3	Essential genes in Mtb rich_Uncertain_Short_included	Table S2, S3, and S4	Mycobacterium tuberculosis H37Rv	string, all-genes	601	Yusuke Minato	Fri May 24 2019 09:06 am
4	More essential in Mtb minimal		Mycobacterium tuberculosis H37Rv	all-genes	130	Yusuke Minato	Fri May 24 2019 09:04 am
5	Pwys for Pathway Collage test.		Escherichia coli K-12 substr. MG1655	pathways	5	Suzanne Paley	Mon May 20 2019 09:15 am
6	all_genes_pathways_reactions		Escherichia coli B str. REL606	all-genes	4366	John Favate	Thu May 09 2019 09:37 am
7	Essential genes in Mtb YM rich identified by Tn-seq but not predicted by FBA		Mycobacterium tuberculosis H37Rv	all-genes	136	Yusuke Minato	Tue May 07 2019 01:30 pm
8	Essential genes in Mtb rich predicted by FBA but not identified by Tn-seq		Mycobacterium tuberculosis H37Rv	all-genes	42	Yusuke Minato	Tue May 07 2019 10:11 am
9	Tn-seq essential and highly conserved genes		Mycobacterium tuberculosis H37Rv	all-genes	356	Yusuke Minato	Tue Apr 16 2019 04:26 pm
10	Essential genes in all three studies (Griffin et.al. DeJesus et al. Minato et.al.)		Mycobacterium tuberculosis H37Rv	all-genes	458	Yusuke Minato	Tue Apr 16 2019 09:29 am
11	operon information	Description: gene name, function, operon name, regulation diagram, transcription factor regulator, b...	Escherichia coli K-12 substr. MG1655	all-genes	95	Amanda Wilczek	Fri Mar 15 2019 11:53 am
12	More essential in Mtb rich		Mycobacterium tuberculosis H37Rv	all-genes	98	Yusuke Minato	Mon Feb 25 2019 03:50 pm
13	All compounds of MetaCyc		MetaCyc	proteins, compounds	15263	Richard Billington	Fri Feb 22 2019 05:52 pm
14	Filtered rows from All reactions of E. coli K-12 substr. MG1655	Genes of Enzymatic-Reactions	Escherichia coli K-12 substr. MG1655	reactions	720	Peter Midford	Tue Jan 15 2019 11:39 am
15	New SmartTable with isoprene		MetaCyc	pathways, compounds	2	Angel Mojarro	Tue Dec 18 2018 10:39 am
16	NtrC transcription factor binding sites of E. coli K-12 substr. MG1655	Created via the following steps: 1) Start from Special ST of all transcription-factor binding sites ...	Escherichia coli K-12 substr. MG1655	dna-binding-sites	31	Suzanne Paley	Tue Dec 18 2018 10:37 am
17	New SmartTable with dimethylsulfoniopropanoate		MetaCyc	pathways, compounds	4	Angel Mojarro	Mon Oct 29 2018 02:14 pm
18	New SmartTable with methyl chloride		MetaCyc	pathways, compounds	3	Angel Mojarro	Mon Oct 29 2018 02:13 pm
19	New SmartTable with dimethyl sulfide		MetaCyc	pathways, compounds	5	Angel Mojarro	Mon Oct 29 2018 02:12 pm
20	Example MetaCyc enzymes		MetaCyc	proteins	16	Peter Karp	Wed Oct 03 2018 08:17 am

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Database lists are saved as SmartTables that you can edit from your My SmartTables page. To add organisms from a saved list, check the box next to the list name and then click the "Add" button.

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